Working in Sugarcube 2, and have managed to get typed.js to function in the way I want, but one of the typed elements is the link to the next passage and while it visually behaves like a link clicking on it has no effect. Is there a way I'm missing to have the link appear through the typed.js effect and still function or does the javascript break link macros? I'm not sure if I'm overlooking something.
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Knowing this will help anyone that tries to debug your issue.
Typed.js does not currently seem suitable for anything with attached event handlers. So, yes, it will break all passage links (regardless of the source: wiki links, <a data-passage></a> links, macro links).
Alternatively you could do the typed passage with no links, then have a goto macro that moves onto a new passage of the same text with links, and have a nice fade in effect on all the text, so it types it out, then flashes again to include the link.